Atlantic herring Protein: Clu h 1 | β-Parvalbumin

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Isoform:

Empirical Proteotypic Peptide Explorer:

This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.

Sequence - 109 amino acids

MALASLLKGADIDAALKACEAKDSFKHKDFFAKIGLATKSAADLKKAFEIIDQDKSGFIEEEELKLFLQNFKAGARALTDAETKAFLKAGDADGDGMIGVDEFAVMIKP

UniProt: C6GKU6 IUIS: Clu h 1

Empirical Proteotypic Peptide Explorer:

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.

Sequence - 110 amino acids

MAFAGLLSDADIAAALGACTAADTFDHKSFFKKVGLSGKSADDVKKPFYIIDQDKSGFIEEEELKLFLQNFKAGARALSDKETKAFLAAGDADGDGMIGVDEFAVMVKAR

UniProt: C6GKU7 IUIS: Clu h 1

Empirical Proteotypic Peptide Explorer:

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.

Sequence - 109 amino acids

MAFAAFLKEADITAALGACKGADSFDHKAFFAKVGLKGKSGDELKKAFEIIDQDKSGFIEEEELKLFLQNFCKGARALTDGETKKFLKAGDSDNDGKIGIDEFAALINH

UniProt: C6GKU8 IUIS: Clu h 1

Peptide Selector Tool

Explore peptide targets for mass spectrometry by adjusting the selection criteria below. Results from empirical and computational prediction tools have been aggregated for convenience.

Exclude:

Cysteine

Methionine

NXS / NXT

RP / KP

RR / KK / KR / RK

Nonspecific

Peptide Characteristics:

Minimum length:

Maximum length:

1	Peptide	2	ESP⁴	CONSeQ⁵
^	MALASLLK	G	0.197	0.4112
K	GADIDAALK	A	0.294	0.56118
K	AFEIIDQDK	S	0.34	0.5003
K	SGFIEEEELK	L	0.391	0.547
K	LFLQNFK	A	0.32	0.19254
R	ALTDAETK	A	0.23	0.4154
K	AGDADGDGMIGVDEFAVMIKP	$	0.407	0.27328
^	MAFAGLLSDADIAAALGACTAADTFDHK	S	0.557	0.1522
K	KPFYIIDQDK	S	0.261	0.387
K	SGFIEEEELK	L	0.391	0.547
K	LFLQNFK	A	0.32	0.19254
K	AFLAAGDADGDGMIGVDEFAVMVK	A	0.462	0.15506
^	MAFAAFLK	E	0.295	0.38974
K	EADITAALGACK	G	0.565	0.785
K	GADSFDHK	A	0.254	0.14468
K	AFEIIDQDK	S	0.34	0.5003
K	SGFIEEEELK	L	0.391	0.547
K	LFLQNFCK	G	0.362	0.19102
R	ALTDGETK	K	0.21	0.2659
K	AGDSDNDGK	I	0.252	0.10896
K	IGIDEFAALINH	$	0.536	0.2339

¹ Previous amino acid (^ = Start of protein)

² Next amino acid ($ = End of protein)

³ Exp. = Number of publications in which this peptide has been reported experimentally

⁴ ESP = ESP Predictor. Fusaro VA, et al. Nat Botechnol 2009; 27(2): 190-198. doi

⁵ CONSeQ = CONSeQuence. Eyers CE, et al. Mol Cell Proteomics 2011; 10(11). doi

Underline: Peptide occurs within the first 20 amino acids from the start of the protein. Use caution as the protein may contain a cleaved signaling sequence.

Strike-through: Peptide is present in a protein from another allergen species and is thus nonspecific.